| Stage | Winner | Time | Avg.speed |
| CS1 |
| Super Competitive 1 |
2.50 km |
| Burns, Richard | 3m 06,0s |
48.39 km/h |
| CS2 |
| Oltepesi - Ngong 1 |
108.12 km |
| Makinen, Tommi | 47m 45,0s |
135.86 km/h |
| CS3 |
| Hunter's Lookout - Timbuctoo 1 |
71.90 km |
| McRae, Colin | 35m 18,0s |
122.21 km/h |
| CS4 |
| Olkejiado - II Bisel 1 |
109.87 km |
| McRae, Colin | 55m 48,0s |
118.14 km/h |
| CS5 |
| Kajiado - Corner Baridi 1 |
48.96 km |
| McRae, Colin | 20m 45,0s |
141.57 km/h |
| CS6 |
| Super Competitive 2 |
2.50 km |
| McRae, Colin | 3m 06,0s |
48.39 km/h |
| CS7 |
| Crater Lake - Mau Narok |
79.42 km |
| Makinen, Tommi | 36m 03,0s |
132.18 km/h |
| CS8 |
| Solai - Gari La Moshi 1 |
66.49 km |
| Makinen, Tommi | 32m 04,0s |
124.41 km/h |
| CS9 |
| Nyaru - Eldama Ravine |
87.19 km |
| Liatti, Piero | 55m 39,0s |
94.01 km/h |
| CS10 |
| Marigat - Mogotio |
78.70 km |
| Auriol, Didier | 34m 51,0s |
135.49 km/h |
| CS11 |
| Solai - Gari La Moshi 2 |
66.49 km |
| Sainz, Carlos | 32m 11,0s |
123.96 km/h |
| CS12 |
| Oltepesi - Ngong 2 |
108.12 km |
| Burns, Richard | 49m 46,0s |
130.35 km/h |
| CS13 |
| Hunter's Lookout - Timbuctoo 2 |
71.90 km |
| Vatanen, Ari | 35m 31,0s |
121.46 km/h |
| CS14 |
| Olkejiado - II Bisel 2 |
109.87 km |
| Kankkunen, Juha | 56m 42,0s |
116.26 km/h |
| CS15 |
| Kajiado - Corner Baridi 2 |
48.96 km |
| Kankkunen, Juha | 21m 47,0s |
134.86 km/h |
| CS16 |
| Super Competitive 3 |
2.50 km |
| Burns, Richard | 3m 09,0s |
47.62 km/h |
|
