| Leg 1 | Sunday 21-Mar-1999 |
| |
| 14:15 | SS1 | Baltar | 3.20 km | |
| 14:23 | | Service A - Baltar (20 min) | | |
| |
| | Monday 22-Mar-1999 |
| |
| 07:13 | | Service B - Ponte de Lima (10 min) | | |
| 07:46 | SS2 | Ponte de Lima Este | 23.64 km | |
| 08:39 | SS3 | Ponte de Lima Oeste | 25.84 km | |
| 10:04 | | Service C - Ponte de Lima (20 min) | | |
| 12:01 | SS4 | Fafe - Lameirinha 1 | 15.20 km | |
| 12:25 | SS5 | Fafe - Luilhas 1 | 10.55 km | |
| 13:15 | | Service D - Vieira do Minho (10 min) | | |
| 13:38 | SS6 | Cabreira 1 | 27.60 km | |
| 14:31 | | Service E - Cabeceiras de Basto (20 min) | | |
| 15:20 | SS7 | Fafe - Lameirinha 2 | 15.20 km | |
| 15:44 | SS8 | Fafe - Luilhas 2 | 10.55 km | |
| 16:47 | SS9 | Cabreira 2 | 27.60 km | |
| 17:30 | | Service F - Cabeceiras de Basto (45 min) | | |
| | | Leg 1 total: | 159.38 km | |
| |
| Leg 2 | Tuesday 23-Mar-1999 |
| |
| 07:20 | | Service G - Oliveira de Azemeis (10 min) | | |
| 07:59 | SS10 | Sever do Vouga | 14.83 km | |
| 08:44 | SS11 | Ladario - Oliveira de Frades | 11.26 km | |
| 10:02 | | Service H - Viseu (20 min) | | |
| 11:19 | SS12 | Agueira | 23.33 km | |
| 11:55 | SS13 | Mortazel | 18.81 km | |
| 12:25 | SS14 | Mortagua | 17.24 km | |
| 13:01 | | Service I - Mortagua (20 min) | | |
| 14:02 | SS15 | Tabua | 13.49 km | |
| 14:53 | SS16 | Arganil - Coja 1 | 20.96 km | |
| 15:34 | SS17 | Salgueiro - Gois 1 | 19.70 km | |
| 16:39 | | Service J - Arganil Sarzedo (20 min) | | |
| 17:44 | SS18 | Arganil - Coja 2 | 20.96 km | |
| 18:25 | SS19 | Salgueiro - Gois 2 | 19.70 km | |
| 19:15 | | Service K - Arganil Sarzedo (45 min) | | |
| | | Leg 2 total: | 180.28 km | |
| |
| Leg 3 | Wednesday 24-Mar-1999 |
| |
| 09:15 | | Service L - Falgueiras (10 min) | | |
| 09:55 | SS20 | Vizo - Celorico de Basto | 11.84 km | |
| 10:48 | SS21 | Fridao | 14.20 km | |
| 11:34 | SS22 | Aboboreira | 17.96 km | |
| 12:10 | | Service M - Marco de Canaveses (10 min) | | |
| 12:55 | SS23 | Lousada - Barrosas | 15.85 km | |
| 13:30 | | Service N - Felgueiras (20 min) | | |
| | | Leg 3 total: | 59.85 km | |
| | | Rally total: | 399.51 km | |
